MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-876-v2

Family name MIR-876 (all species)
Seed GGAUUUC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-876
Paralogues Cfa-Mir-876-v1 
Orthologues Bta-Mir-876-v2  Cja-Mir-876-v2  Cpo-Mir-876-v2  Dno-Mir-876-v2  Eca-Mir-876-v2  Ete-Mir-876  Hsa-Mir-876-v2  Laf-Mir-876-v2  Mml-Mir-876-v2  Mmr-Mir-876  Ocu-Mir-876-v2  Pab-Mir-876-v2  Rno-Mir-876-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr11: 46819472-46819534 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-876-v2)		 Mir-876-v2 chr11: 46819472-46819534 [-] UCSC Ensembl
Mir-876-v1 chr11: 46819474-46819532 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAAGCUUUACCCAAACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUACAAAGUAAUUCAUAGUGCUUCACAGGUGCUUCUGCAGUUGAUCU
Get precursor sequence
Structure
        10          20        30        40        50        60 
ACCAAGCUUUACCCAAA--|       UG         U               UAUCUAAG 
                   CUGUGAAG  CUGUGGAUU CUUUGUGAAUCACCA        \
                   GACACUUC  GAUACUUAA GAAACAUUUGGUGGU        C
UCUAGUUGACGUCUUCGUG^       GU         U               GGUGUAAU 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-876-v2_5p
mirBase accessionMIMAT0009932
Sequence 
0- UGGAUUUCUUUGUGAAUCACCA -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-876
miRDB: MIMAT0009932
Star sequence

Cfa-Mir-876-v2_3p*
mirBase accessionNone
Sequence 
41- GUGGUUUACAAAGUAAUUCAUA -63
Get sequence