| MirGeneDB ID | Ete-Mir-876 |
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| Family name |
MIR-876 (all species) |
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| Seed |
GGUGGUU |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-876
Cfa-Mir-876
Cpo-Mir-876
Dno-Mir-876
Hsa-Mir-876
Mml-Mir-876
Ocu-Mir-876
Rno-Mir-876
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980356: 5665041-5665099 [-]
UCSC
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Precursor
(pre-Mir +30nt flank) |
UUACCAAGCUUAUGACUGUGAAGUGCUGUGGAUUUCUUUGUGAAUCACCAUAUCUAAGCUAAUGUGGUGGUGGUUUUCAAAGUAAUUCACAUUGCUUCACAGAUGCUUCUAUAGGUGAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UUACCAAGCUUAUGACU--| GC U U AUCUAAG
GUGAAGU UGUGGAUU CUUUG GAAUCACCAU \
CACUUCG ACACUUAA GAAAC UUUGGUGGUG C
AAGUGGAUAUCUUCGUAGA^ UU U U GUGUAAU
110 100 90 80 70 60 |
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| Deep sequencing |
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Ete-Mir-876_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GAUUUCUUUGUGAAUCACCAUA -22
Get sequence
|
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| Mature sequence |
Ete-Mir-876_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- UGGUGGUUUUCAAAGUAAUUCA -59
Get sequence
|
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