MirGeneDB ID | Agr-Mir-2722 |
Family name |
MIR-2722 (all species) |
Seed |
AGGUGUU |
Species |
West Indian fuzzy chiton (Acanthopleura granulata ) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Eba-Mir-2722
Esc-Mir-2722
Hru-Mir-2722
Lgi-Mir-2722
Lhy-Mir-2722
Mgi-Mir-2722
Mom-Mir-2722
Npo-Mir-2722
Obi-Mir-2722
Ovu-Mir-2722
Pve-Mir-2722
Rph-Mir-2722
|
Node of Origin (locus) |
Mollusca
|
Node of Origin (family) |
Mollusca
|
Genome context (GCA_016165875.1_ASM1616587v1_Acanthopleura_granula) |
JABBOT010000002.1: 24092608-24092668 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGGAUAAAGAUGAGUAUCAACUCCCGGGUGAGGUGUUUCACGGGCGCUCCACUCACGCAGGGGAUUAGUGGCGCCGUGUAAACAUCUAACCCGUGAGAAGAACGAACACGGACUAUUGAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAGGAUAAAGAUGAGUA-- AA C G -| G UC CACGCA
UC CUC CGGGU AGGUGUUU CACGG CGC CACU \
AG GAG GCCCA UCUACAAA GUGCC GCG GUGA G
CAGUUAUCAGGCACAAGCA AA U A U^ - -- UUAGGG
. 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Agr-Mir-2722_5p |
mirBase accession | None |
Sequence |
0- GAGGUGUUUCACGGGCGCUCCACU -24
Get sequence
|
Co-mature sequence |
Agr-Mir-2722_3p |
mirBase accession | None |
Sequence |
39- UGGCGCCGUGUAAACAUCUAAC -61
Get sequence
|