MirGeneDB 3.0

MirGeneDB ID

Agr-Mir-2722

Family name MIR-2722 (all species)
Seed AGGUGUU
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues
Orthologues Eba-Mir-2722  Esc-Mir-2722  Hru-Mir-2722  Lgi-Mir-2722  Lhy-Mir-2722  Mgi-Mir-2722  Mom-Mir-2722  Npo-Mir-2722  Obi-Mir-2722  Ovu-Mir-2722  Pve-Mir-2722  Rph-Mir-2722 
Node of Origin (locus) Mollusca
Node of Origin (family) Mollusca
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)
JABBOT010000002.1: 24092608-24092668 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGGAUAAAGAUGAGUAUCAACUCCCGGGUGAGGUGUUUCACGGGCGCUCCACUCACGCAGGGGAUUAGUGGCGCCGUGUAAACAUCUAACCCGUGAGAAGAACGAACACGGACUAUUGAC
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Structure
        10          20        30         40        50        60 
CAGGAUAAAGAUGAGUA--  AA   C     G        -|    G   UC    CACGCA 
                   UC  CUC CGGGU AGGUGUUU CACGG CGC  CACU      \
                   AG  GAG GCCCA UCUACAAA GUGCC GCG  GUGA      G
CAGUUAUCAGGCACAAGCA  AA   U     A        U^    -   --    UUAGGG 
 .       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Agr-Mir-2722_5p

mirBase accessionNone
Sequence
0- GAGGUGUUUCACGGGCGCUCCACU -24
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Co-mature sequence

Agr-Mir-2722_3p

mirBase accessionNone
Sequence
39- UGGCGCCGUGUAAACAUCUAAC -61
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