MirGeneDB 3.0

MirGeneDB ID

Npo-Mir-2722

Family name MIR-2722 (all species)
Seed GGCGCCG
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues
Orthologues Agr-Mir-2722  Eba-Mir-2722  Esc-Mir-2722  Hru-Mir-2722  Lgi-Mir-2722  Lhy-Mir-2722  Mgi-Mir-2722  Mom-Mir-2722  Obi-Mir-2722  Ovu-Mir-2722  Pve-Mir-2722  Rph-Mir-2722 
Node of Origin (locus) Mollusca
Node of Origin (family) Mollusca
Genome context
(GCA_018389105_NPO)
JACATO010000642.1: 35108-35165 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGACGGGUCGGUUGCUUUACCCCACAAGAGAGGUGUUUCAUGGGCGCUACAUUGCGCUACACGUGGCGCCGUGUAAACAUCUAACUGGUGAGGUAAAAACGUUCCACACGCAGUAA
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Structure
        10          20        30        40         50        
GCAGACGGGUCGGUUGC--      C   A  AG        -|    G      AUUGC 
                   UUUACC CAC AG  AGGUGUUU CAUGG CGCUAC     G
                   AAAUGG GUG UC  UCUACAAA GUGCC GCGGUG     C
AAUGACGCACACCUUGCAA      A   G  AA        U^    -      CACAU 
      110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Npo-Mir-2722_5p* (predicted)

mirBase accessionNone
Sequence
0- AGAGGUGUUUCAUGGGCGCUACA -23
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Mature sequence

Npo-Mir-2722_3p (predicted)

mirBase accessionNone
Sequence
35- UGGCGCCGUGUAAACAUCUAACU -58
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