MirGeneDB 3.0

MirGeneDB ID

Mgi-Mir-2722

Family name MIR-2722 (all species)
Seed AAGGUGU
Species Pacific oyster (Magallana gigas)
MiRBase ID
Paralogues
Orthologues Agr-Mir-2722  Eba-Mir-2722  Esc-Mir-2722  Hru-Mir-2722  Lgi-Mir-2722  Lhy-Mir-2722  Mom-Mir-2722  Npo-Mir-2722  Obi-Mir-2722  Ovu-Mir-2722  Pve-Mir-2722  Rph-Mir-2722 
Node of Origin (locus) Mollusca
Node of Origin (family) Mollusca
Genome context
(CGI_GCA_000297895.1)
scaffold1347: 252941-252998 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAAAAUCCAGCUGAUUAGAAUUUGUUGGAAAGGUGUUUCACAGGCGCUACAUUGGAGAUGACGUGGCGCCGUGUAAACACCUACCCGACAGGUCAGCAAUGACGUCAUUACCUUUG
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Structure
        10           20        30        40         50        
UGGAAAAUCCAGCUGAUUA---| A        AA        -   A        AUUGG 
                      GA UUUGUUGG  AGGUGUUU CAC GGCGCUAC     A
                      CU GGACAGCC  UCCACAAA GUG CCGCGGUG     G
GUUUCCAUUACUGCAGUAACGA^ -        CA        U   -        CAGUA 
      110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
A- D- D- F- L- Ea Eg Fe Gi Ha He Ju La Ma Ma Ma Pe Re Sp Um
Mature sequence

Mgi-Mir-2722_5p

mirBase accessionNone
Sequence
0- AAAGGUGUUUCACAGGCGCUAC -22
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Co-mature sequence

Mgi-Mir-2722_3p

mirBase accessionNone
Sequence
35- UGGCGCCGUGUAAACACCUACCC -58
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