| MirGeneDB ID | Esc-Mir-2722 |
|---|
| Family name |
MIR-2722 (all species) |
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| Seed |
GGCGCCG |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cgi-Mir-2722
Lgi-Mir-2722
Npo-Mir-2722
Obi-Mir-2722
Ovu-Mir-2722
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| Node of Origin (locus) |
Mollusca
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| Node of Origin (family) |
Mollusca
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Mir-2722_pre_SRIE01006744.1:1321073-1321216: 44-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAUAAAACCUGUGAUUGUCGCUCUGCGAGAGAGGUGUUUCAUGGGCGCUACACUGCUCAGAAAGUGGCGCCGUGUAAACAUCUACCUUGUCGUGUAGAAUUCACAGCGAGCGGAAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCAUAAAACCUGUGAUUGU----| UCU AG - G ACUGC
CGC GCGAG AGGUGUUU CAUGG CGCUAC U
GUG UGUUC UCUACAAA GUGCC GCGGUG C
UAAAGGCGAGCGACACUUAAGAU^ C-- CA U - AAAGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Esc-Mir-2722_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AGAGGUGUUUCAUGGGCGCUACA -23
Get sequence
|
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| Mature sequence |
Esc-Mir-2722_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UGGCGCCGUGUAAACAUCUACCU -58
Get sequence
|
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