| MirGeneDB ID | Obi-Mir-2722 |
|---|
| Family name |
MIR-2722 (all species) |
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| Seed |
GGCGCCG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
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| Paralogues |
|
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| Orthologues |
Cgi-Mir-2722
Esc-Mir-2722
Lgi-Mir-2722
Npo-Mir-2722
Ovu-Mir-2722
|
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| Node of Origin (locus) |
Mollusca
|
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| Node of Origin (family) |
Mollusca
|
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Genome context
(PRJNA270931_OBI) |
KQ418841: 32620-32677 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGUUACUACUGGACAUUGUGUCGCCACAAGAGAGGUGUUUCAUGGGCGCUACACUGUUCUGAAAGUGGCGCCGUGUAAACAUCUAGCUUGUUGCGAAAAAUACUUCAUCGACAGAAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGUUACUACUGGACAUUGUG-- C AG -| G ACUGU
UCGC ACAAG AGGUGUUU CAUGG CGCUAC U
AGCG UGUUC UCUACAAA GUGCC GCGGUG C
CGAAGACAGCUACUUCAUAAAA U GA U^ - AAAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-2722_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGAGGUGUUUCAUGGGCGCUACA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-2722_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UGGCGCCGUGUAAACAUCUAGCU -58
Get sequence
|
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