MirGeneDB ID | Obi-Mir-2722 |
Family name |
MIR-2722 (all species) |
Seed |
GGCGCCG |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
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Orthologues |
Agr-Mir-2722
Eba-Mir-2722
Esc-Mir-2722
Hru-Mir-2722
Lgi-Mir-2722
Lhy-Mir-2722
Mgi-Mir-2722
Mom-Mir-2722
Npo-Mir-2722
Ovu-Mir-2722
Pve-Mir-2722
Rph-Mir-2722
|
Node of Origin (locus) |
Mollusca
|
Node of Origin (family) |
Mollusca
|
Genome context (PRJNA270931_OBI) |
KQ418841: 32620-32677 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGUUACUACUGGACAUUGUGUCGCCACAAGAGAGGUGUUUCAUGGGCGCUACACUGUUCUGAAAGUGGCGCCGUGUAAACAUCUAGCUUGUUGCGAAAAAUACUUCAUCGACAGAAGC
Get precursor sequence
|
Structure | 10 20 30 40 50
CGUUACUACUGGACAUUGUG-- C AG -| G ACUGU
UCGC ACAAG AGGUGUUU CAUGG CGCUAC U
AGCG UGUUC UCUACAAA GUGCC GCGGUG C
CGAAGACAGCUACUUCAUAAAA U GA U^ - AAAGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Obi-Mir-2722_5p* |
mirBase accession | None |
Sequence |
0- AGAGGUGUUUCAUGGGCGCUACA -23
Get sequence
|
Mature sequence |
Obi-Mir-2722_3p |
mirBase accession | None |
Sequence |
35- UGGCGCCGUGUAAACAUCUAGCU -58
Get sequence
|