MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-36-P29b

Family name MIR-36 (all species)
Seed CACCGGG
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-36-P26a  Ava-Mir-36-P26b  Ava-Mir-36-P27  Ava-Mir-36-P28a  Ava-Mir-36-P28b  Ava-Mir-36-P29a 
Orthologues Agr-Mir-36  Asu-Mir-36-o29-v1  Asu-Mir-36-o29-v2  Bge-Mir-36  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075495.1: 11035731-11035793 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAUAGAAAGAAAAGUUUUUUUUUCGUUAACACCGGGCUAAUGUAGUACAUUUGACAUCUUGACUAUGUACCACACUUGUUAUCGGUGCAUAACGCGAAAAAACAAGAAAGUCUAGUUAUCA
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Structure
        10          20        30           40        50         
UAGAUAGAAAGAAAAGU--       U     A-      --| UAA   A      UUGACA 
                   UUUUUUU CGUUA  CACCGG  GC   UGU GUACAU      U
                   AAAAAAG GCAAU  GUGGCU  UG   ACA CAUGUA      C
ACUAUUGAUCUGAAAGAAC       C     AC      AU^ UUC   C      UCAGUU 
 120       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on th 3p arm.
3' NTU No
MotifsNo
Tissue expression
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Mature sequence

Ava-Mir-36-P29b_5p
mirBase accessionNone
Sequence 
0- ACACCGGGCUAAUGUAGUACAU -22
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Star sequence

Ava-Mir-36-P29b_3p*
mirBase accessionNone
Sequence 
38- GUACCACACUUGUUAUCGGUGCAUA -63
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