MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-340

Family name MIR-340 (all species)
Seed UAUAAAG
Species Cow (Bos taurus)
MiRBase ID bta-mir-340
Paralogues
Orthologues Cfa-Mir-340  Cja-Mir-340  Cpo-Mir-340  Dno-Mir-340  Eca-Mir-340  Ete-Mir-340  Hsa-Mir-340  Laf-Mir-340  Mml-Mir-340  Mmr-Mir-340  Mmu-Mir-340  Ocu-Mir-340  Pab-Mir-340  Rno-Mir-340-P1  Rno-Mir-340-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037334.1: 1249039-1249103 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUUUCUAAAACUGUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUGUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUAUACCACAGAAUAUUG
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Structure
        10          20        30        40         50        60 
GAUUUCUAAAACUGUUU--     U      AU       CAA-|     U    GUCAUGUG 
                   GUACC GGUGUG  UAUAAAG    UGAGAC GAUU        U
                   UAUGG CCAUAC  AUAUUUC    ACUCUG CUAG        C
GUUAUAAGACACCAUAUUC     U      CG       AUUG^     C    GGUGUUUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-340_5p
mirBase accessionNone
Sequence 
0- UUAUAAAGCAAUGAGACUGAUU -22
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Star sequence

Bta-Mir-340_3p*
mirBase accessionMIMAT0009296
Sequence 
42- UCCGUCUCAGUUACUUUAUAGCC -65
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Proposed targets TargetScanVert: bta-miR-340