MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-340

Family name MIR-340 (all species)
Seed UAUAAAG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-340
Paralogues
Orthologues Bta-Mir-340  Cfa-Mir-340  Cja-Mir-340  Cpo-Mir-340  Eca-Mir-340  Ete-Mir-340  Hsa-Mir-340  Laf-Mir-340  Mml-Mir-340  Mmr-Mir-340  Mmu-Mir-340  Ocu-Mir-340  Pab-Mir-340  Rno-Mir-340-P1  Rno-Mir-340-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH576995: 199441-199505 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUCUAAAACCGUUUUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUAGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUACCUUAUUCCACAGAUCAUUG
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Structure
        10          20        30        40         50        60 
AUUUCUAAAACCGUUUU--     U      AU       CAA-|     U    GUCAUAUG 
                   GUACC GGUGUG  UAUAAAG    UGAGAC GAUU        U
                   CAUGG CCAUAC  AUAUUUC    ACUCUG CUAG        A
GUUACUAGACACCUUAUUC     U      CG       AUUG^     C    GGUGUUUG 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-340_5p
mirBase accessionMIMAT0047823
Sequence 
0- UUAUAAAGCAAUGAGACUGAUU -22
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Star sequence

Dno-Mir-340_3p*
mirBase accessionMIMAT0047824
Sequence 
42- UCCGUCUCAGUUACUUUAUAGCC -65
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