| MirGeneDB ID | Bta-Mir-671 |
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| Family name |
MIR-671 (all species) |
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| Seed |
CCGGUUC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-671
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| Paralogues |
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| Orthologues |
Cfa-Mir-671
Cpo-Mir-671
Dno-Mir-671
Ete-Mir-671
Hsa-Mir-671
Mml-Mir-671
Mmu-Mir-671
Ocu-Mir-671
Rno-Mir-671
Sha-Mir-671
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| Node of Origin (locus) |
Theria
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| Node of Origin (family) |
Theria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037331.1: 113815922-113815981 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGCCGCCGACCUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUUUUCCGGGCCGUGGAGCCAGGGCUGGUGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGGCCGCCGACCUGGCA--| A A A GA UGAUGG
GGCC GGAAGAGG GGA GCCCUG GGGGCUGGAGG \
CCGG CCUUUUCC CCU CGGGAC UCUUGGCCUCC A
CGUGGUCGGGACCGAGGUG^ G A - -- UUUUGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-671_5p* |
| mirBase accession | MIMAT0009365 |
|---|
| Sequence |
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-671
|
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| Mature sequence |
Bta-Mir-671_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence
|
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