| MirGeneDB ID | Laf-Mir-671 |
|---|---|
| Family name | MIR-671 (all species) |
| Seed | GGAAGCC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-671 Cfa-Mir-671 Cja-Mir-671 Cpo-Mir-671 Dno-Mir-671 Eca-Mir-671 Ete-Mir-671 Hsa-Mir-671 Mml-Mir-671 Mmr-Mir-671 Mmu-Mir-671 Neu-Mir-671 Ocu-Mir-671 Pab-Mir-671 Rno-Mir-671 Sha-Mir-671 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010039.1: 59837438-59837497 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGCUGGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUCCGGGCCGUAGAGCCAGGGCUGGUGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGGCUGGUGAACUGGCA--| A A A GA UGAUGG GGCC GGAAGAGG GGA GCCCUG GGGGCUGGAGG \ CCGG CCUUCUCC CCU CGGGAC UCUUGGCCUCC A CGUGGUCGGGACCGAGAUG^ G A - -- UUUUGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Laf-Mir-671_5p |
| mirBase accession | None |
| Sequence |
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
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|
| Co-mature sequence | Laf-Mir-671_3p |
| mirBase accession | None |
| Sequence |
39- UCCGGUUCUCAGGGCUCCACC -60
Get sequence
|
