MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-671

Family name MIR-671 (all species)
Seed CCGGUUC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-671
Paralogues
Orthologues Bta-Mir-671  Cja-Mir-671  Cpo-Mir-671  Dno-Mir-671  Eca-Mir-671  Ete-Mir-671  Hsa-Mir-671  Laf-Mir-671  Mml-Mir-671  Mmr-Mir-671  Mmu-Mir-671  Neu-Mir-671  Ocu-Mir-671  Pab-Mir-671  Rno-Mir-671  Sha-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(canFam3_add)
chr16: 15278792-15278851 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCUGGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUCCGGGCCGUGGAGCCAGGGCUGGUGC
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Structure
        10          20        30        40        50        60 
UGGCUGGUGAACUGGCA--|   A        A   A      GA           UGAUGG 
                   GGCC GGAAGAGG GGA GCCCUG  GGGGCUGGAGG      \
                   CCGG CCUUCUCC CCU CGGGAC  UCUUGGCCUCC      A
CGUGGUCGGGACCGAGGUG^   G        A   -      --           UUUUGU 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-671_5p*

mirBase accessionNone
Sequence
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
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Mature sequence

Cfa-Mir-671_3p

mirBase accessionMIMAT0009926
Sequence
39- UCCGGUUCUCAGGGCUCCACC -60
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Proposed targets TargetScanVert: cfa-miR-671
miRDB: MIMAT0009926