MirGeneDB ID | Neu-Mir-671 |
---|---|
Family name | MIR-671 (all species) |
Seed | GGAAGCC |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Bta-Mir-671 Cfa-Mir-671 Cja-Mir-671 Cpo-Mir-671 Dno-Mir-671 Eca-Mir-671 Ete-Mir-671 Hsa-Mir-671 Laf-Mir-671 Mml-Mir-671 Mmr-Mir-671 Mmu-Mir-671 Ocu-Mir-671 Pab-Mir-671 Rno-Mir-671 Sha-Mir-671 |
Node of Origin (locus) | Theria |
Node of Origin (family) | Theria |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 94797472-94797531 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | UGGCCGGGGAACUGGCUGGACAGGAAGAAGAGGAAGCCCUUGAGGGGCUAGAGGUGCUAGAUGUUUUUCUACGCUUCUCUGGACUGCACCUUUUUCGUGCAGUUGAGCCAGGCCUGGUGCGet precursor sequence |
Structure | 10 20 30 40 50 UGGCCGGGGAACUGGCUGGA-| G AGGA C UU - UGCUA CA GAAGAAG AG CC GAGGGGC UAGAGG \ GU CUUUUUC UC GG CUCUUCG AUCUUU G CGUGGUCCGGACCGAGUUGAC^ G CACG A U- C UUGUA . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14) |
Mature sequence | Neu-Mir-671_5p (predicted) |
mirBase accession | None |
Sequence |
0- AGGAAGCCCUUGAGGGGCUAGAGG -24
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|
Co-mature sequence | Neu-Mir-671_3p (predicted) |
mirBase accession | None |
Sequence |
36- UUCUACGCUUCUCUGGACUGCACC -60
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|