| MirGeneDB ID | Neu-Mir-671 |
|---|
| Family name |
MIR-671 (all species) |
|---|
| Seed |
GGAAGCC |
|---|
| Species |
Tammar Wallaby (Notamacropus eugenii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-671
Cfa-Mir-671
Cja-Mir-671
Cpo-Mir-671
Dno-Mir-671
Eca-Mir-671
Ete-Mir-671
Hsa-Mir-671
Laf-Mir-671
Mml-Mir-671
Mmr-Mir-671
Mmu-Mir-671
Ocu-Mir-671
Pab-Mir-671
Rno-Mir-671
Sha-Mir-671
|
|---|
| Node of Origin (locus) |
Theria
|
|---|
| Node of Origin (family) |
Theria
|
|---|
Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051815.1: 94797472-94797531 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGGCCGGGGAACUGGCUGGACAGGAAGAAGAGGAAGCCCUUGAGGGGCUAGAGGUGCUAGAUGUUUUUCUACGCUUCUCUGGACUGCACCUUUUUCGUGCAGUUGAGCCAGGCCUGGUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGCCGGGGAACUGGCUGGA-| G AGGA C UU - UGCUA
CA GAAGAAG AG CC GAGGGGC UAGAGG \
GU CUUUUUC UC GG CUCUUCG AUCUUU G
CGUGGUCCGGACCGAGUUGAC^ G CACG A U- C UUGUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
| |
|
|
|---|
| Mature sequence |
Neu-Mir-671_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGAAGCCCUUGAGGGGCUAGAGG -24
Get sequence
|
|---|
| Co-mature sequence |
Neu-Mir-671_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- UUCUACGCUUCUCUGGACUGCACC -60
Get sequence
|
|---|
