| MirGeneDB ID | Pab-Mir-671 |
|---|---|
| Family name | MIR-671 (all species) |
| Seed | GGAAGCC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-671 Cfa-Mir-671 Cja-Mir-671 Cpo-Mir-671 Dno-Mir-671 Eca-Mir-671 Ete-Mir-671 Hsa-Mir-671 Laf-Mir-671 Mml-Mir-671 Mmr-Mir-671 Mmu-Mir-671 Neu-Mir-671 Ocu-Mir-671 Rno-Mir-671 Sha-Mir-671 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054685.2: 148701299-148701358 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGGCAGGUGAACUGGCAGGCCAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGAUGGAUGUUUUCCUCCGGUUCUCAGGGCUCCACCUCUUUCGGGCUGUAGAGCCAGGGCUGGUGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGGCAGGUGAACUGGCA--| A A A GA UGAUGG GGCC GGAAGAGG GGA GCCCUG GGGGCUGGAGG \ UCGG CUUUCUCC CCU CGGGAC UCUUGGCCUCC A CGUGGUCGGGACCGAGAUG^ G A - -- UUUUGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-671_5p |
| mirBase accession | None |
| Sequence |
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
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|
| Star sequence | Pab-Mir-671_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- UCCGGUUCUCAGGGCUCCACC -60
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|
