MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-671

Family name MIR-671 (all species)
Seed GGAAGCC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-671  Cfa-Mir-671  Cja-Mir-671  Cpo-Mir-671  Dno-Mir-671  Eca-Mir-671  Ete-Mir-671  Hsa-Mir-671  Laf-Mir-671  Mml-Mir-671  Mmr-Mir-671  Mmu-Mir-671  Neu-Mir-671  Ocu-Mir-671  Pab-Mir-671  Rno-Mir-671 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(DEVIL_add)		 GL861667.1: 766514-766573 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCCGGGGAACUGGCUGGACAGGAAGAGGAGGAAGCCCUGGAGGGGCUGGAGGUGCUUGACGUUUUCCUACGCUUCUCAGGGCUGCACCUUUUUCGGGCAGUUGAGCCGGGCCUGGUGC
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Structure
        10        20          30        40          50         
UGGCCGGGGAACUGGCUGGACA--|       AGGA       G      U--     UGCU 
                        GGAAGAGG    AGCCCUG AGGGGC   GGAGG    U
                        CUUUUUCC    UCGGGAC UCUUCG   CCUUU    G
CGUGGUCCGGGCCGAGUUGACGGG^       ACG-       -      CAU     UGCA 
.       110       100        90         80         70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-671_5p (predicted)
mirBase accessionNone
Sequence 
0- AGGAAGCCCUGGAGGGGCUGGAGG -24
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Co-mature sequence

Sha-Mir-671_3p (predicted)
mirBase accessionNone
Sequence 
36- UCCUACGCUUCUCAGGGCUGCACC -60
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