MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-28

Family name MIR-28 (all species)
Seed AGGAGCU
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-28
Paralogues
Orthologues Bta-Mir-28  Cja-Mir-28  Cpo-Mir-28  Dno-Mir-28  Eca-Mir-28  Ete-Mir-28  Hsa-Mir-28  Laf-Mir-28  Mml-Mir-28  Mmr-Mir-28  Mmu-Mir-28  Ocu-Mir-28  Pab-Mir-28  Rno-Mir-28 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr34: 20971517-20971578 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUACAAGAAUUAAAAACGGUCCUUGCCCUCAAGGAGCUCACAGUCUAUUGAGUUGCCUUUCUGACUUUCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUUGUUCACCUGAAAAAAA
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Structure
        10          20        30        40        50        60
AUACAAGAAUUAAAAAC--|  C         A                U  AGUUGCCUU 
                   GGU CUUGCCCUC AGGAGCUCACAGUCUA UG         U
                   UCA GGACGGGAG UCCUCGAGUGUUAGAU AC         C
AAAAAAAGUCCACUUGUUU^  C         G                C  CCUUUCAGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-28_5p
mirBase accessionNone
Sequence 
0- AAGGAGCUCACAGUCUAUUGAG -22
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Co-mature sequence

Cfa-Mir-28_3p
mirBase accessionMIMAT0006675
Sequence 
40- CACUAGAUUGUGAGCUCCUGGA -62
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Proposed targets TargetScanVert: cfa-miR-28
miRDB: MIMAT0006675