| MirGeneDB ID | Laf-Mir-28 |
|---|---|
| Family name | MIR-28 (all species) |
| Seed | AGGAGCU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-28 Cfa-Mir-28 Cja-Mir-28 Cpo-Mir-28 Dno-Mir-28 Eca-Mir-28 Ete-Mir-28 Hsa-Mir-28 Mml-Mir-28 Mmr-Mir-28 Mmu-Mir-28 Ocu-Mir-28 Pab-Mir-28 Rno-Mir-28 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010052.1: 9163845-9163906 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGAAUGAAUGAAAAACGGUCCUUGCCCUCAAGGAGCUCACAGUCUAUUGAGUUGCCUUUCUGACUUUCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUUGUUCAACUGGAAAAAAGet precursor sequence |
| Structure | 10 20 30 40 50 60 AAGAAUGAAUGAAAAAC--| C A U AGUUGCCUU GGU CUUGCCCUC AGGAGCUCACAGUCUA UG U UCA GGACGGGAG UCCUCGAGUGUUAGAU AC C AAAAAAGGUCAACUUGUUU^ C G C CCUUUCAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-28_5p |
| mirBase accession | None |
| Sequence |
0- AAGGAGCUCACAGUCUAUUGAG -22
Get sequence
|
| Co-mature sequence | Laf-Mir-28_3p |
| mirBase accession | None |
| Sequence |
40- CACUAGAUUGUGAGCUCCUGGA -62
Get sequence
|
