MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-28

Family name MIR-28 (all species)
Seed AGGAGCU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-28  Cfa-Mir-28  Cja-Mir-28  Cpo-Mir-28  Dno-Mir-28  Eca-Mir-28  Ete-Mir-28  Hsa-Mir-28  Mml-Mir-28  Mmr-Mir-28  Mmu-Mir-28  Ocu-Mir-28  Pab-Mir-28  Rno-Mir-28 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010052.1: 9163845-9163906 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAUGAAUGAAAAACGGUCCUUGCCCUCAAGGAGCUCACAGUCUAUUGAGUUGCCUUUCUGACUUUCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUUGUUCAACUGGAAAAAA
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Structure
        10          20        30        40        50        60
AAGAAUGAAUGAAAAAC--|  C         A                U  AGUUGCCUU 
                   GGU CUUGCCCUC AGGAGCUCACAGUCUA UG         U
                   UCA GGACGGGAG UCCUCGAGUGUUAGAU AC         C
AAAAAAGGUCAACUUGUUU^  C         G                C  CCUUUCAGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-28_5p
mirBase accessionNone
Sequence 
0- AAGGAGCUCACAGUCUAUUGAG -22
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Co-mature sequence

Laf-Mir-28_3p
mirBase accessionNone
Sequence 
40- CACUAGAUUGUGAGCUCCUGGA -62
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