| MirGeneDB ID | Ete-Mir-28 |
|---|
| Family name |
MIR-28 (all species) |
|---|
| Seed |
ACUAGAU |
|---|
| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-28
Cfa-Mir-28
Cja-Mir-28
Cpo-Mir-28
Dno-Mir-28
Eca-Mir-28
Hsa-Mir-28
Laf-Mir-28
Mml-Mir-28
Mmr-Mir-28
Mmu-Mir-28
Ocu-Mir-28
Pab-Mir-28
Rno-Mir-28
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(echTel2) |
JH980368: 3181567-3181628 [-]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
AACAAACAAACAAGCACGGUCCUUGCCCUCAAGGAGCGCACAGUCUAUUGAGUUGCCGUUCUGACUUCCCCACUAGAUUGUGAGCUCCUGGAGGGCAGGCACUUUCGUUCAACUGGGAAAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AACAAACAAACAAGCAC--| C A G U AGUUGCCGU
GGU CUUGCCCUC AGGAGC CACAGUCUA UG U
UCA GGACGGGAG UCCUCG GUGUUAGAU AC C
AAAAAGGGUCAACUUGCUU^ C G A C CCCUUCAGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ete-Mir-28_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AAGGAGCGCACAGUCUAUUGAG -22
Get sequence
|
|---|
| Mature sequence |
Ete-Mir-28_3p |
| mirBase accession | None |
|---|
| Sequence |
40- CACUAGAUUGUGAGCUCCUGGA -62
Get sequence
|
|---|
