MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-28

Family name MIR-28 (all species)
Seed AGGAGCU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-28
Paralogues
Orthologues Bta-Mir-28  Cfa-Mir-28  Cja-Mir-28  Dno-Mir-28  Eca-Mir-28  Ete-Mir-28  Hsa-Mir-28  Laf-Mir-28  Mml-Mir-28  Mmr-Mir-28  Mmu-Mir-28  Ocu-Mir-28  Pab-Mir-28  Rno-Mir-28 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_7: 53348173-53348234 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CAAGAAAUAAAAACAUUGGUCCUUGCCCUCAAGGAGCUCACAGUCUAUUGAGUUACUUUUAAGACUUUCCCACUAGAUUGGGAGCUCCUGGAGGGCAGGCACUUAUGUUCUUCUGAAAAUGA
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Structure
        10          20        30        40        50        60
CAAGAAAUAAAAACAUU--|  C         A        A       U  AGUUACUUU 
                   GGU CUUGCCCUC AGGAGCUC CAGUCUA UG         U
                   UCA GGACGGGAG UCCUCGAG GUUAGAU AC         A
AGUAAAAGUCUUCUUGUAU^  C         G        G       C  CCUUUCAGA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-28_5p
mirBase accessionMIMAT0046894
Sequence 
0- AAGGAGCUCACAGUCUAUUGAG -22
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Co-mature sequence

Cpo-Mir-28_3p
mirBase accessionMIMAT0046895
Sequence 
40- CACUAGAUUGGGAGCUCCUGGA -62
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