| MirGeneDB ID | Cfa-Mir-675 |
|---|
| Family name |
MIR-675 (all species) |
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| Seed |
UGUAUGC |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cja-Mir-675
Cpo-Mir-675
Dno-Mir-675
Eca-Mir-675
Hsa-Mir-675
Laf-Mir-675
Mml-Mir-675
Mmr-Mir-675
Mmu-Mir-675
Neu-Mir-675
Pab-Mir-675
Rno-Mir-675
Sha-Mir-675
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| Node of Origin (locus) |
Theria
|
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| Node of Origin (family) |
Theria
|
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Genome context
(canFam3_add) |
chr18: 46206405-46206461 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGUUCCCACGUGGCACUGCGGCCCAGGGGCGGGCGCGGAGAGGGCCCACAGUGCACUCGGUGACACUGUAUGCCCUCACCGCUCAGCCCCUGGGUCUGGCGUGACGGACAGGACAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGUUCCCACGUGGCACUGC--| G C A CC CACU
GGCCCAGGGGC GG GCGG GAGGGC ACAGUG C
CUGGGUCCCCG CU CGCC CUCCCG UGUCAC G
CGACAGGACAGGCAGUGCGGU^ A - A UA AGUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
| An |
An |
An |
Bl |
Ce |
Co |
He |
Hi |
Hi |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Star sequence |
Cfa-Mir-675_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGGCGCGGAGAGGGCCCACAGUG -23
Get sequence
|
|---|
| Mature sequence |
Cfa-Mir-675_3p |
| mirBase accession | None |
|---|
| Sequence |
35- CUGUAUGCCCUCACCGCUCAGC -57
Get sequence
|
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