| MirGeneDB ID | Pab-Mir-675 |
|---|---|
| Family name | MIR-675 (all species) |
| Seed | UGUAUGC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-675 Cja-Mir-675 Cpo-Mir-675 Dno-Mir-675 Eca-Mir-675 Hsa-Mir-675 Laf-Mir-675 Mml-Mir-675 Mmr-Mir-675 Mmu-Mir-675 Neu-Mir-675 Rno-Mir-675 Sha-Mir-675 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054688.2: 1985962-1986018 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGGUCCCACGAGGCACUGCGGCCCAGGGUCUGGUGCGGAGAGGGCCCACAGUGGACUUGGUGACGCUGUAUGCCCUCACCGCUCAGCCCCUGGGGCUGGCUUGGCAGACAGUACAGCGet precursor sequence |
| Structure | 10 20 30 40 50 CGGUCCCACGAGGCACUG- -| U U A CC GACU CGG CCCAGGG CUGG GCGG GAGGGC ACAGUG U GUC GGGUCCC GACU CGCC CUCCCG UGUCGC G CGACAUGACAGACGGUUCG G^ C - A UA AGUG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Pab-Mir-675_5p* |
| mirBase accession | None |
| Sequence |
0- UGGUGCGGAGAGGGCCCACAGUG -23
Get sequence
|
| Mature sequence | Pab-Mir-675_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- CUGUAUGCCCUCACCGCUCAGC -57
Get sequence
|
