MirGeneDB ID | Mmr-Mir-675 |
Family name |
MIR-675 (all species) |
Seed |
UGUAUGC |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cfa-Mir-675
Cja-Mir-675
Cpo-Mir-675
Dno-Mir-675
Eca-Mir-675
Hsa-Mir-675
Laf-Mir-675
Mml-Mir-675
Mmu-Mir-675
Neu-Mir-675
Pab-Mir-675
Rno-Mir-675
Sha-Mir-675
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007665.1: 10358943-10358999 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUGCCCCAGGAGGCACUGCGGCCCAGGGGCUGGCGCGGAGAGGGCGCACAGCGGGCUUGGCGACGCUGUAUGCCCUCACCGCCCAGCCCCCGGGACUGGCGCGGCAGACAGUUCAGC
Get precursor sequence
|
Structure | 10 20 30 40 50
CUGCCCCAGGAGGCACUG- -| A C A C GGCU
CGG CCC GGGGCUGG GCGG GAGGGCG ACAGCG U
GUC GGG CCCCGACC CGCC CUCCCGU UGUCGC G
CGACUUGACAGACGGCGCG A^ C - A A AGCG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Star sequence |
Mmr-Mir-675_5p* |
mirBase accession | None |
Sequence |
0- UGGCGCGGAGAGGGCGCACAGCG -23
Get sequence
|
Mature sequence |
Mmr-Mir-675_3p |
mirBase accession | None |
Sequence |
35- CUGUAUGCCCUCACCGCCCAGC -57
Get sequence
|