MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-105-P1

Family name MIR-105 (all species)
Seed CAAAUGC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-105
Paralogues
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cja-Mir-105-P1  Eca-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mml-Mir-105-P1  Mmr-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Pab-Mir-105-P1  Rno-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_197: 745545-745603 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GCUGCAAGAUCUUCUGUGUGUGCACCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUUAUGCACCACGGAUGUUUGAGCAUGUGCUAUGGUGUCUACAUUUGCAACACUGCCAUCU
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Structure
        10          20        30        40        50         
GCUGCAAGAUCUUCUGU--|  U         U  A          UC        GCUG 
                   GUG GCACCGUGG CA AUGCUCAGAC  CUGUGGUG    C
                   CAU UGUGGUAUC GU UACGAGUUUG  GGCACCAC    U
UCUACCGUCACAACGUUUA^  C         -  G          UA        GUAU 
       110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-105-P1_5p
mirBase accessionMIMAT0046953
Sequence 
0- UCAAAUGCUCAGACUCCUGUGGUG -24
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Star sequence

Cpo-Mir-105-P1_3p* (predicted)
mirBase accessionMIMAT0046954
Sequence 
36- CCACGGAUGUUUGAGCAUGUGCU -59
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