MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-105-P1

Family name MIR-105 (all species)
Seed CAAGUGC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-105
Paralogues
Orthologues Bta-Mir-105-P1  Cfa-Mir-105-P1  Cja-Mir-105-P1  Cpo-Mir-105-P1  Eca-Mir-105-P1  Ete-Mir-105-P1  Hsa-Mir-105-P1  Mml-Mir-105-P1  Mmr-Mir-105-P1  Mmu-Mir-105-P1  Ocu-Mir-105-P1  Pab-Mir-105-P1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 152585542-152585600 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACCUGUUGUUCUCUCUGUGUGUAUUGUAGUCAAGUGCUCAGAUGUCUGUGGUGGCUGCUUAUGUAUCACGGAUGUUUGAGCAUGUGCUAUGGUAUCUACUUUUACAACAUUGCCAUCU
Get precursor sequence
Structure
        10          20        30        40        50         
CACCUGUUGUUCUCUCU--|  U    UG   U  A                    GCUG 
                   GUG GUAU  UAG CA GUGCUCAGAUGUCUGUGGUG    C
                   CAU UAUG  AUC GU UACGAGUUUGUAGGCACUAU    U
UCUACCGUUACAACAUUUU^  C    GU   -  G                    GUAU 
       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Mature sequence

Rno-Mir-105-P1_5p
mirBase accessionMIMAT0012825
Sequence 
0- UCAAGUGCUCAGAUGUCUGUGGUG -24
Get sequence
Proposed targets microrna.org: MIMAT0012825
TargetScanVert: rno-miR-105
miRDB: MIMAT0012825
Star sequence

Rno-Mir-105-P1_3p* (predicted)
mirBase accessionNone
Sequence 
36- UCACGGAUGUUUGAGCAUGUGCU -59
Get sequence