Mir-105-P1

MirGeneDB ID

Mmu-Mir-105-P1

Family name

MIR-105 (all species)

Seed

CAAGUGC

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-105

Paralogues

Orthologues

Bta-Mir-105-P1 Cfa-Mir-105-P1 Cpo-Mir-105-P1 Ete-Mir-105-P1 Hsa-Mir-105-P1 Mml-Mir-105-P1 Ocu-Mir-105-P1 Rno-Mir-105-P1

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(mm10)

chrX: 72591511-72591569 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GUUGCAAGAUGCUCUGUGUGUGCAUUUUAGCCAAGUGCUCAGAUGCUUGUGGUGGCUGCUUAUGCACCACGAAUGCUUGAGCAUGUGCUAUGGUACCUACUUUUACAACAUUGCCAUCU

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Structure

        10            20        30        40        50         
GUUGCAAGAUGCUCUGUGU----|   AUUU    CAA        A GC        GCUG 
                       GUGC    UAGC   GUGCUCAG U  UUGUGGUG    C
                       CAUG    AUCG   UACGAGUU G  AGCACCAC    U
UCUACCGUUACAACAUUUUCAUC^   GU--    UG-        C UA        GUAU 
       110       100          90         80        70        60

Deep sequencing

3' NTU

Unknown

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

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Mature sequence

Mmu-Mir-105-P1_5p (predicted)

mirBase accession

MIMAT0004856

Sequence

0- CCAAGUGCUCAGAUGCUUGUGGUG -24

Get sequence

Proposed targets

microrna.org: MIMAT0004856
TargetScanVert: mmu-miR-105
miRDB: MIMAT0004856

Star sequence

Mmu-Mir-105-P1_3p* (predicted)

mirBase accession

None

Sequence

36- CCACGAAUGCUUGAGCAUGUGCU -59

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