| MirGeneDB ID | Ete-Mir-105-P1 |
|---|
| Family name |
MIR-105 (all species) |
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| Seed |
CAAAUGC |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bta-Mir-105-P1
Cfa-Mir-105-P1
Cpo-Mir-105-P1
Hsa-Mir-105-P1
Mml-Mir-105-P1
Mmu-Mir-105-P1
Ocu-Mir-105-P1
Rno-Mir-105-P1
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980398: 4387984-4388041 [+]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
CUUGAAAGAGCUUCUGUGUGUGCAUUGUGGUCAAAUGCUCAGACUCCUGUUGUGGCUGUUUGUGCACCAUGGAUUUUGAGCAUGUGCUAUGGCGUCUACUUCUGCAGCAUUGCAAUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUGAAAGAGCUUCUGU--| U A UG U A C - U GGCU
GUG GC U UGG CA AUGCUCAGA UCC UG UGU G
CAU UG G AUC GU UACGAGUUU AGG AC ACG U
UCUAACGUUACGACGUCUU^ C C GU - G U U C UGUU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Ete-Mir-105-P1_5p (predicted) |
| mirBase accession | None |
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| Sequence |
0- UCAAAUGCUCAGACUCCUGUUGUG -24
Get sequence
|
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| Star sequence |
Ete-Mir-105-P1_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
36- CCAUGGAUUUUGAGCAUGUGCU -58
Get sequence
|
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