MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-551-P2

Family name MIR-551 (all species)
Seed CGACCCA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-551
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(cavPor3)		 scaffold_100: 1116239-1116298 [+] UCSC
Precursor
(pre-Mir +30nt flank)
UUAACUGCCCGACGUGCUCUUGUGGCCCAGGAAAUCAAGCGUGGGUGAGACCUGGUGCGGAAGGGGAAGGCGACCCAUACUUGGUUUCAGAGGCUGCAAGAAUACCUGCAUUUCUAAGGG
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Structure
        10          20        30        40        50        60
UUAACUGCCCGACGUGC--|    UG   CAG         CG     GAGA   GGUGCG 
                   UCUUG  GCC   GAAAUCAAG  UGGGU    CCU      G
                   AGAAC  CGG   CUUUGGUUC  ACCCA    GGA      A
GGGAAUCUUUACGUCCAUA^    GU   AGA         AU     GC--   AGGGGA 
.       110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cpo-Mir-551-P2_5p*
mirBase accessionMIMAT0047347
Sequence 
0- GAAAUCAAGCGUGGGUGAGACCU -23
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Mature sequence

Cpo-Mir-551-P2_3p
mirBase accessionMIMAT0047348
Sequence 
39- GCGACCCAUACUUGGUUUCAG -60
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