MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-551-P2

Family name MIR-551 (all species)
Seed CGACCCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-551b
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Oan-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr14: 63366504-63366563 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGUUUUACAGAUGAGCUCUCCUGGCCCAUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACAGGAAGGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUACCUACAGUUGUAAGAG
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Structure
        10          20        30        40        50        60
AGGUUUUACAGAUGAGC--|   C     CA          CG     GAGA   GGUGCA 
                   UCUC UGGCC  UGAAAUCAAG  UGGGU    CCU      G
                   AGAG GUCGG  ACUUUGGUUC  ACCCA    GGA      A
GAGAAUGUUGACAUCCAUA^   C     AG          AU     GC--   AGGACA 
.       110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-551-P2_5p*
mirBase accessionMIMAT0048529
Sequence 
0- GAAAUCAAGCGUGGGUGAGACCU -23
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Mature sequence

Ocu-Mir-551-P2_3p
mirBase accessionMIMAT0048530
Sequence 
39- GCGACCCAUACUUGGUUUCAG -60
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