| MirGeneDB ID | Tgu-Mir-551-P2 |
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| Family name |
MIR-551 (all species) |
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| Seed |
CGACCCA |
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| Species |
Zebra finch (Taeniopygia guttata) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Aca-Mir-551-P2
Ami-Mir-551-P2
Bta-Mir-551-P2
Cfa-Mir-551-P2
Cli-Mir-551-P2
Cmi-Mir-551-P2
Cpi-Mir-551-P2
Cpo-Mir-551-P2
Dno-Mir-551-P2
Dre-Mir-551-P2
Ete-Mir-551-P2
Gga-Mir-551-P2
Gja-Mir-551-P2
Gmo-Mir-551-P2
Hsa-Mir-551-P2
Lch-Mir-551-P2
Loc-Mir-551-P2
Mal-Mir-551-P2
Mdo-Mir-551-P2
Mml-Mir-551-P2
Mmu-Mir-551-P2
Mun-Mir-551-P2
Oan-Mir-551-P2
Ocu-Mir-551-P2
Pbv-Mir-551-P2
Rno-Mir-551-P2
Sha-Mir-551-P2
Spt-Mir-551-P2
Sto-Mir-551-P2
Xla-Mir-551-P2a
Xla-Mir-551-P2b
Xtr-Mir-551-P2
|
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| Node of Origin (locus) |
Vertebrata
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(TaeGut1_add) |
9: 22241121-22241181 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGACUCUGCCCAAGCAGCCCCAUGGCUCCAGAAAUCAAGGGUGGGUAAGACCUGGUGAGCAAACUCUAAGGCGACCCAUACUUGGUUUCAGGGGCUGUGGGCGCUCGUCUCCGCCGGGUCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AGACUCUGCCCAAGCAGC--| A GG AAGA GGUGAGC
CCCAUGGCUCC GAAAUCAAG UGGGU CCU \
GGGUGUCGGGG CUUUGGUUC ACCCA GGA A
CCUGGGCCGCCUCUGCUCGC^ A AU GC-- AUCUCAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Tgu-Mir-551-P2_5p* |
| mirBase accession | None |
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| Sequence |
0- GAAAUCAAGGGUGGGUAAGACCU -23
Get sequence
|
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| Mature sequence |
Tgu-Mir-551-P2_3p |
| mirBase accession | None |
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| Sequence |
40- GCGACCCAUACUUGGUUUCAG -61
Get sequence
|
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