MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-551-P2

Family name MIR-551 (all species)
Seed CGACCCA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-551-P1 
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cli-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dno-Mir-551-P2  Dre-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635855.1: 6684631-6684690 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGAUAACAAUAUAACCUGAAAGGCCUCAGAAAUCAAGGGUGGGUGAGGCCUAUGAUAUACAAGGAAGGCGACCCAUACUUGGUUUCCUAGGACUGGGUGAUCAUCGUUGAUCGAGAGG
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Structure
        10        20          30        40        50        60
ACUGAUAACAAUAUAACCUGAA--| G   CA         GG     GAG    AUGAUA 
                        AG CCU  GAAAUCAAG  UGGGU   GCCU      U
                        UC GGA  CUUUGGUUC  ACCCA   CGGA      A
GGAGAGCUAGUUGCUACUAGUGGG^ A   UC         AU     G--    AGGAAC 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Star sequence

Cmi-Mir-551-P2_5p*
mirBase accessionNone
Sequence 
0- GAAAUCAAGGGUGGGUGAGGCCU -23
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Mature sequence

Cmi-Mir-551-P2_3p
mirBase accessionNone
Sequence 
39- GCGACCCAUACUUGGUUUCCU -60
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