MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-988

Family name MIR-988 (all species)
Seed CCCUUGU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-988
Paralogues
Orthologues Aae-Mir-988  Aga-Mir-988  Dan-Mir-988  Dmo-Mir-988  Dsi-Mir-988  Dya-Mir-988  Gpa-Mir-988  Hme-Mir-988 
Node of Origin (locus) Panorpida
Node of Origin (family) Panorpida
Genome context
(Drosophila_melanogaster_BDGP6)		 2R: 12158888-12158945 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-988)		 Mir-988 2R: 12158888-12158945 [-] UCSC Ensembl
Mir-281-P2-v1 2R: 12170164-12170230 [-] UCSC Ensembl
Mir-281-P2-v2 2R: 12170164-12170230 [-] UCSC Ensembl
Mir-281-P1-v1 2R: 12170383-12170449 [-] UCSC Ensembl
Mir-281-P1-v2 2R: 12170384-12170448 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGUUGACGGCGGUACCGGGCAUUUUGGGUGUGUGAUUUGUAGCAAAGUGAUAUGUAUUUGAUCAUCCCCUUGUUGCAAACCUCACGCCAAAGAUGAUCUGCGAAAUACACAGUGGUA
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Structure
        10         20         30        40        50        
UAGUUGACGGCGGUACC-   -|     G      UGA          AGU   AUGUA 
                  GGG CAUUUU GGUGUG   UUUGUAGCAA   GAU     U
                  UCU GUAGAA CCGCAC   AAACGUUGUU   CUA     U
AUGGUGACACAUAAAGCG   A^     A      UCC          CCC   CUAGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-988_5p*
mirBase accessionMIMAT0020886
Sequence 
0- GUGUGAUUUGUAGCAAAGUGAU -22
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Mature sequence

Dme-Mir-988_3p
mirBase accessionMIMAT0005505
Sequence 
36- CCCCUUGUUGCAAACCUCACGC -58
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Proposed targets microrna.org: MIMAT0005505
TargetScanFly: dme-miR-988