Mir-988

MirGeneDB ID

Dsi-Mir-988

Family name

MIR-988 (all species)

Seed

CCCUUGU

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-988

Paralogues

Orthologues

Aae-Mir-988 Aga-Mir-988 Dan-Mir-988 Dme-Mir-988 Dmo-Mir-988 Dya-Mir-988 Gpa-Mir-988 Hme-Mir-988

Node of Origin (locus)

Panorpida

Node of Origin (family)

Panorpida

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

2R: 8750716-8750773 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-988)

Mir-988 2R: 8750716-8750773 [-] UCSC Ensembl
Mir-281-P1-v1 2R: 8762476-8762542 [-] UCSC Ensembl
Mir-281-P1-v2 2R: 8762477-8762541 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UUUUUGAUGGCGGUACCGGGCAUUUUGGGUGUGUGAUUUGUAGCAAAGUGAUAUGUAUUUGAUCAUCCCCUUGUUGCAAACCUCACGCCAAAGAUGAUCUGAGAAAUACACAGUGAUA

Get precursor sequence

Structure

        10         20         30        40        50        
UUUUUGAUGGCGGUACC-   -|     G      UGA          AGU   AUGUA 
                  GGG CAUUUU GGUGUG   UUUGUAGCAA   GAU     U
                  UCU GUAGAA CCGCAC   AAACGUUGUU   CUA     U
AUAGUGACACAUAAAGAG   A^     A      UCC          CCC   CUAGU 
      110       100        90        80        70        60