MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-652

Family name MIR-652 (all species)
Seed AUGGCGC
Species Horse (Equus caballus)
MiRBase ID eca-mir-652
Paralogues
Orthologues Bta-Mir-652  Cfa-Mir-652  Cja-Mir-652  Cpo-Mir-652  Dno-Mir-652  Ete-Mir-652  Hsa-Mir-652  Laf-Mir-652  Mml-Mir-652  Mmr-Mir-652  Mmu-Mir-652  Ocu-Mir-652  Pab-Mir-652  Rno-Mir-652 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 90969690-90969751 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGGGCUGCCACGAAUGGCUAUGCACUGCACAACCCUAGGAGAGGGUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGCACAACCUACACAACUGUACUCGGC
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Structure
        10         20        30        40        50        60   
GCAGGGCUGCCACGAAU-| CUA                  GAGAG           CAUAGA 
                  GG   UGCACUGCACAACCCUAG     GGUGCCAUUCA      \
                  CC   ACGUGACGUGUUGGGAUC     CCGCGGUAAGU      C
CGGCUCAUGUCAACACAU^ AAC                  A----           UAAUAU 
120       110       100        90            80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-652_5p*
mirBase accessionNone
Sequence 
0- ACAACCCUAGGAGAGGGUGCCAUUCA -26
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Mature sequence

Eca-Mir-652_3p
mirBase accessionMIMAT0013240
Sequence 
41- AAUGGCGCCACUAGGGUUGUG -62
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