| MirGeneDB ID | Laf-Mir-652 |
|---|---|
| Family name | MIR-652 (all species) |
| Seed | AUGGCGC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-652 Cfa-Mir-652 Cja-Mir-652 Cpo-Mir-652 Dno-Mir-652 Eca-Mir-652 Ete-Mir-652 Hsa-Mir-652 Mml-Mir-652 Mmr-Mir-652 Mmu-Mir-652 Ocu-Mir-652 Pab-Mir-652 Rno-Mir-652 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010059.1: 21629056-21629117 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCAGGGCCGCCACGAACGGCUAUGCACUGCACAACCCUAGGAGAGGGUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGCACAACCUAUACAACUGUACUCGGUGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCAGGGCCGCCACGAAC-| CUA GAGAG ACAUAGA GG UGCACUGCACAACCCUAG GGUGCCAUUC \ CC ACGUGACGUGUUGGGAUC CCGCGGUAAG C UGGCUCAUGUCAACAUAU^ AAC A---- UUAAUAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Yes |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-652_5p* |
| mirBase accession | None |
| Sequence |
0- ACAACCCUAGGAGAGGGUGCCAUUC -25
Get sequence
|
| Mature sequence | Laf-Mir-652_3p |
| mirBase accession | None |
| Sequence |
41- AAUGGCGCCACUAGGGUUGUG -62
Get sequence
|
