MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-652

Family name MIR-652 (all species)
Seed AUGGCGC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-652  Cfa-Mir-652  Cja-Mir-652  Cpo-Mir-652  Dno-Mir-652  Eca-Mir-652  Ete-Mir-652  Hsa-Mir-652  Laf-Mir-652  Mml-Mir-652  Mmu-Mir-652  Ocu-Mir-652  Pab-Mir-652  Rno-Mir-652 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 38593105-38593166 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGGGCCACCACGAAUGGCUAUGCACUGCACAACCCUAGGAGGGGGUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGUGCACAACCUACACAACUGUACUCGGU
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Structure
        10         20        30        40        50        60   
GCAGGGCCACCACGAAU-| CUA                  GAGGG         CACAUAGA 
                  GG   UGCACUGCACAACCCUAG     GGUGCCAUU        \
                  CC   ACGUGACGUGUUGGGAUC     CCGCGGUAA        C
UGGCUCAUGUCAACACAU^ AAC                  A----         GUUAAUAU 
120       110       100        90            80        70
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-652_5p*

mirBase accessionNone
Sequence
0- ACAACCCUAGGAGGGGGUGCCAUU -24
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Mature sequence

Mmr-Mir-652_3p

mirBase accessionNone
Sequence
41- AAUGGCGCCACUAGGGUUGUG -62
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