MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-277-P9

Family name MIR-277 (all species)
Seed AAAUGCA
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-277b
Paralogues Egr-Mir-277-P7  Egr-Mir-277-P8 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsa-Mir-277-P9  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) Neodermata
Node of Origin (family) Protostomia
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000012.1: 779202-779268 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGCGAGCCUAAUUCUGUUGAGAUAGCACAGACCAGAUUUUGCAGUUUAUAACGCUACCCACUAAAAGAGUAUAAAUGCAAAAUAUCUGGUUAUGAGUUUCUGCAGAAGAACUGCUGAAGUGAAAG
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Structure
        10          20         30           40        50        60  
UCUGCGAGCCUAAUUCUG--   -   U   A  -        --|     G      ACGCUACCC 
                    UUG AGA AGC CA GACCAGAU  UUUGCA UUUAUA         \
                    GAC UCU UUG GU UUGGUCUA  AAACGU AAAUAU         A
GAAAGUGAAGUCGUCAAGAA   G   -   A  A        UA^     -      GAGAAAAUC 
     120       110        100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Er Er Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr
Star sequence

Egr-Mir-277-P9_5p*
mirBase accessionMIMAT0041734
Sequence 
0- AGACCAGAUUUUGCAGUUUAUA -22
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Mature sequence

Egr-Mir-277-P9_3p
mirBase accessionMIMAT0041735
Sequence 
43- UAAAUGCAAAAUAUCUGGUUAUGA -67
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