MirGeneDB 2.1
MirGeneDB ID

Hsa-Mir-339

Family name MIR-339 (all species)
Seed CCCUGUC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-339
Paralogues
Orthologues Bta-Mir-339  Cfa-Mir-339  Cpo-Mir-339  Dno-Mir-339  Ete-Mir-339  Mml-Mir-339  Mmu-Mir-339  Ocu-Mir-339  Rno-Mir-339 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chr7: 1022955-1023012 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUGCUCCGCAGGGGCGGGGCGGCCGCUCUCCCUGUCCUCCAGGAGCUCACGUGUGCCUGCCUGUGAGCGCCUCGACGACAGAGCCGGCGCCUGCCCCAGUGUCUGCGCCGGGACCA
Get precursor sequence
Structure
        10          20        30        40        50        
CUGUGCUCCGCAGGGGC--|      C    CUCC     C  C   A       UGUG 
                   GGGGCGG CGCU    CUGUC UC AGG GCUCACG    C
                   CCCCGUC GCGG    GACAG AG UCC CGAGUGU    C
ACCAGGGCCGCGUCUGUGA^      C    CCGA     C  C   G       CCGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-339_5p
mirBase accessionMIMAT0000764
Sequence 
0- UCCCUGUCCUCCAGGAGCUCACG -23
Get sequence
Proposed targets microrna.org: MIMAT0000764
TargetScanVert: hsa-miR-339-5p
TargetMiner: hsa-miR-339-5p
miRDB: MIMAT0000764
Co-mature sequence

Hsa-Mir-339_3p
mirBase accessionMIMAT0004702
Sequence 
35- UGAGCGCCUCGACGACAGAGCCG -58
Get sequence
Proposed targets microrna.org: MIMAT0004702
TargetScanVert: hsa-miR-339-3p
TargetMiner: hsa-miR-339-3p
miRDB: MIMAT0004702