| MirGeneDB ID | Laf-Mir-188-P2 |
|---|---|
| Family name | MIR-188 (all species) |
| Seed | AUGCCUU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-188-P1 Laf-Mir-188-P3 |
| Orthologues | Bta-Mir-188-P2 Cfa-Mir-188-P2 Cja-Mir-188-P2 Cpo-Mir-188-P2 Dno-Mir-188-P2 Eca-Mir-188-P2 Hsa-Mir-188-P2 Mml-Mir-188-P2 Mmr-Mir-188-P2 Mmu-Mir-188-P2 Ocu-Mir-188-P2 Pab-Mir-188-P2 Rno-Mir-188-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010083.1: 353531-353589 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGUGAAUCUCAUGACUUGUUUUUUCUCUUACAUGCCUUGAGUGUAGGACCGUUGGUAUAUUAAUUAUCCUCCCACACCCAAGGCUUGCAGGAGAGAGAGCCUCCUCUUUCCUCUCCAGUGet precursor sequence |
| Structure | 10 20 30 40 50 AGUGAAUCUCAUGACUU--| A U A A CCGUUGGUAU GUUUUUUCUCUU CA GCCUUG GUGU GGA \ CGAGAGAGAGGA GU CGGAAC CACA CCU A UGACCUCUCCUUUCUCCUC^ C U C C CCUAUUAAUU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Laf-Mir-188-P2_5p |
| mirBase accession | None |
| Sequence |
0- CAUGCCUUGAGUGUAGGACCGU -22
Get sequence
|
| Star sequence | Laf-Mir-188-P2_3p* |
| mirBase accession | None |
| Sequence |
37- CCUCCCACACCCAAGGCUUGCA -59
Get sequence
|
