MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-188-P2

Family name MIR-188 (all species)
Seed AUCCCUU
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-188-P1  Pab-Mir-188-P3 
Orthologues Bta-Mir-188-P2  Cfa-Mir-188-P2  Cja-Mir-188-P2  Cpo-Mir-188-P2  Dno-Mir-188-P2  Eca-Mir-188-P2  Hsa-Mir-188-P2  Laf-Mir-188-P2  Mml-Mir-188-P2  Mmr-Mir-188-P2  Mmu-Mir-188-P2  Ocu-Mir-188-P2  Rno-Mir-188-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 50279907-50279966 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAGCAAGCCCUUCCCUGCUCCCUCUCUCACAUCCCUUGCAUGGUGGAGGGUGAGCUUUCUGAAAACCCCUCCCACAUGCAGGGUUUGCAGGAUGGCGAGCCUCAGCUUUCCUUGCUCUC
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Structure
        10          20         30        40        50         
AGAGCAAGCCCUUCCCU--    -| UC   CA  UC         GU      UGAGCUU 
                   GCUC CC  UCU  CA  CCUUGCAUG  GGAGGG       U
                   CGAG GG  AGG  GU  GGGACGUAC  CCUCCC       C
CUCUCGUUCCUUUCGACUC    C^ U-   AC  UU         AC      CAAAAGU 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-188-P2_5p (predicted)
mirBase accessionNone
Sequence 
0- CAUCCCUUGCAUGGUGGAGGGU -22
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Star sequence

Pab-Mir-188-P2_3p* (predicted)
mirBase accessionNone
Sequence 
39- CUCCCACAUGCAGGGUUUGCA -60
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