MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-458

Family name MIR-458 (all species)
Seed UAGCUCU
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Mal-Mir-458  Mun-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tgu-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(LepOcu1)		 LG6: 37681651-37681708 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GGGAUCCGGGACUGCGGUGGUGCAGGUGGCAGCGCCAUUUUCAGAGGUAUAAGCAUGCUGAUUGUCAUAGCUCUUUGAAUGGUACUGCCGCACGCACUCAGAUGACGACUCCCGAACC
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Structure
        10          20        30        40        50        
GGGAUCCGGGACUGCGG-  -|   AG       CG      UC    G   AAGCAUG 
                  UG GUGC  GUGGCAG  CCAUUU  AGAG UAU       C
                  AC CACG  CGCCGUC  GGUAAG  UCUC AUA       U
CCAAGCCCUCAGCAGUAG  U^   CA       AU      UU    G   CUGUUAG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-458_5p*
mirBase accessionNone
Sequence 
0- AGCGCCAUUUUCAGAGGUAUAA -22
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Mature sequence

Loc-Mir-458_3p
mirBase accessionNone
Sequence 
36- AUAGCUCUUUGAAUGGUACUGC -58
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