MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-458

Family name MIR-458 (all species)
Seed UAGCUCU
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-458
Paralogues
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mal-Mir-458  Mun-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(TaeGut1_add)		 13: 16941156-16941213 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGCAGGGGGGACGCGUGGUGCCGAUGGCAGCGCCAUUUCCAGAGCUAUCAACAGUGUCAUUGUCAUAGCUCUUGGAAUGGUUCUGCCAUAAGCACUGGACUGCCAGCUGUGCUUGG
Get precursor sequence
Structure
        10          20        30        40        50        
GGAGCAGGGGGGACGCGU--|    CG       C        C        CAACAGU 
                    GGUGC  AUGGCAG GCCAUUUC AGAGCUAU       G
                    UCACG  UACCGUC UGGUAAGG UCUCGAUA       U
GGUUCGUGUCGACCGUCAGG^    AA       U        U        CUGUUAC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-458_5p*
mirBase accessionMIMAT0026962
Sequence 
0- AGCGCCAUUUCCAGAGCUAUCA -22
Get sequence
Mature sequence

Tgu-Mir-458_3p
mirBase accessionMIMAT0014466
Sequence 
36- AUAGCUCUUGGAAUGGUUCUGC -58
Get sequence