MirGeneDB 2.1
MirGeneDB ID

Tni-Mir-458

Family name MIR-458 (all species)
Seed UAGCUCU
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-458
Paralogues
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gga-Mir-458  Gga-Mir-458-as  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mal-Mir-458  Mun-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tgu-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 1_random: 761745-761801 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAACCCGCUCCGGCUUCUGGUGCAGACGGCAGCGCCAUUUUCAGAGCUAUCAGUGCCAGCGGGUCAUAGCUCUUUAAAUGGUUCUGCUGUAGGCACGCAGCAGAACCAGCAGAACCA
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Structure
        10          20        30        40        50        
GAACCCGCUCCGGCUUC-  -|   AG       C       UC        CAGUGCC 
                  UG GUGC  ACGGCAG GCCAUUU  AGAGCUAU       \
                  AC CACG  UGUCGUC UGGUAAA  UCUCGAUA       A
ACCAAGACGACCAAGACG  G^   GA       U       UU        CUGGGCG 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Sp Sp Sp To
Star sequence

Tni-Mir-458_5p*
mirBase accessionNone
Sequence 
0- AGCGCCAUUUUCAGAGCUAUCA -22
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Mature sequence

Tni-Mir-458_3p
mirBase accessionMIMAT0002937
Sequence 
35- AUAGCUCUUUAAAUGGUUCUGC -57
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