MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-458

Family name MIR-458 (all species)
Seed UAGCUCU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-458a
Paralogues Gga-Mir-458-as 
Orthologues Aca-Mir-458  Ami-Mir-458  Cli-Mir-458  Cli-Mir-458-as  Cpi-Mir-458  Dre-Mir-458  Gja-Mir-458  Gmo-Mir-458  Lch-Mir-458  Loc-Mir-458  Mal-Mir-458  Mun-Mir-458  Oan-Mir-458  Pbv-Mir-458  Spt-Mir-458  Tgu-Mir-458  Tni-Mir-458  Xla-Mir-458-P1  Xla-Mir-458-P2  Xtr-Mir-458 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Gallus_gallus.GRCg6a)		 13: 8954784-8954841 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-458)		 Mir-458 13: 8954784-8954841 [-] UCSC Ensembl
Mir-458-as 13: 8954786-8954843 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGCAGAGCCGCGGCCGUGGUGCAGAUGGCAGCGCCAUUUUCAGAGCUAUAAACAGCGUCAUUGUCAUAGCUCUUUGAAUGGUACUGCCAUAUGUACUGGAAAAACAGCAUCUAUGCU
Get precursor sequence
Structure
        10          20        30        40        50        
GAGCAGAGCCGCGGCCGU--|     G       CG      UC        AAACAGC 
                    GGUGCA AUGGCAG  CCAUUU  AGAGCUAU       G
                    UCAUGU UACCGUC  GGUAAG  UCUCGAUA       U
UCGUAUCUACGACAAAAAGG^     A       AU      UU        CUGUUAC 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-458_5p*
mirBase accessionMIMAT0007745
Sequence 
0- AGCGCCAUUUUCAGAGCUAUAA -22
Get sequence
Proposed targets TargetScanVert: gga-miR-458a-5p
miRDB: MIMAT0007745
Mature sequence

Gga-Mir-458_3p
mirBase accessionMIMAT0007746
Sequence 
36- AUAGCUCUUUGAAUGGUACUGC -58
Get sequence
Proposed targets TargetScanVert: gga-miR-458a-3p
miRDB: MIMAT0007746