MirGeneDB ID | Mml-Mir-320-P2b |
Family name |
MIR-320 (all species) |
Seed |
AAAGCUG |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-320b
|
Paralogues |
Mml-Mir-320-P1
Mml-Mir-320-P2a
Mml-Mir-320-P3
Mml-Mir-320-P4
|
Orthologues |
Cfa-Mir-320
Cpo-Mir-320
Dno-Mir-320
Ete-Mir-320
Hsa-Mir-320-P2b
Mmu-Mir-320
Ocu-Mir-320
Rno-Mir-320
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Eutheria
|
Genome context (rheMac8_trace) |
chr1: 142175764-142175816 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGUCUUCUACCUAAGAAUUCUGUCUCUUAGGCUUUCUCUUCCCAGUUUUCCCAAAGUUGGGAAAAGCUGGGUUGAGAGGGCAAAAGGAAAAAGAAAAAAAAAAUUCUGUCUCU
Get precursor sequence
|
Structure | 10 20 30 40 50
AGUCUUCUACCUAAGAA- GUC AG- UU -| CAA
UUCU UCUU GCUUUCUC CCCAG UUUUCC A
AAGA AGGA CGGGAGAG GGGUC AAAAGG G
UCUCUGUCUUAAAAAAAA AAA AAA UU G^ GUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | As a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. |
3' NTU |
No
|
Motifs | No |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-320-P2b_5p* (predicted) |
mirBase accession | None |
Sequence |
0- GCUUUCUCUUCCCAGUUUUCC -21
Get sequence
|
Mature sequence |
Mml-Mir-320-P2b_3p |
mirBase accession | MIMAT0024312 |
Sequence |
31- AAAAGCUGGGUUGAGAGGGCAA -53
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-320b
|