MirGeneDB ID | Mml-Mir-320-P2b |
---|---|
Family name | MIR-320 (all species) |
Seed | AAAGCUG |
Species | Rhesus monkey (Macaca mulatta) |
MiRBase ID | mml-mir-320b |
Paralogues | Mml-Mir-320-P1 Mml-Mir-320-P2a Mml-Mir-320-P3 Mml-Mir-320-P4 |
Orthologues | Cfa-Mir-320 Cpo-Mir-320 Dno-Mir-320 Eca-Mir-320 Ete-Mir-320 Hsa-Mir-320-P2b Laf-Mir-320 Mmu-Mir-320 Ocu-Mir-320 Pab-Mir-320-P2b Rno-Mir-320 |
Node of Origin (locus) | Catarrhini |
Node of Origin (family) | Eutheria |
Genome context (GCA_003339765.3_Mmul_10_traces) |
ref|NR_128278.1|:1-110: 40-92 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | GCUUUCUCUUCCCAGUUUUCCCAAAGUUGGGAAAAGCUGGGUUGAGAGGGCAAGet precursor sequence |
Structure | 10 20 -- UU -| A GCUUUCUC CCCAG UUUUCCCA A CGGGAGAG GGGUC AAAAGGGU G AA UU G^ U 50 40 30 |
Deep sequencing | |
Comment | As a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced. |
3' NTU | No |
Motifs | No |
Star sequence | Mml-Mir-320-P2b_5p* (predicted) |
mirBase accession | None |
Sequence |
0- GCUUUCUCUUCCCAGUUUUCC -21
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|
Mature sequence | Mml-Mir-320-P2b_3p |
mirBase accession | MIMAT0024312 |
Sequence |
31- AAAAGCUGGGUUGAGAGGGCAA -53
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|
Proposed targets |
TargetScanVert: mml-miR-320b |