MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-320-P4

Family name MIR-320 (all species)
Seed AAAGCUG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-320c
Paralogues Mml-Mir-320-P1  Mml-Mir-320-P2a  Mml-Mir-320-P2b  Mml-Mir-320-P3 
Orthologues Cfa-Mir-320  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P4  Laf-Mir-320  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P4  Rno-Mir-320 
Node of Origin (locus) Catarrhini
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014353.1: 58090382-58090435 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGGUAUGUACAAAUAAAAUGGCAUGGCAGGCCUUCUCUUUCCAGUUCUUCCCAGAAUUGGGAAAAGCUGGGUUGACAGGGUAAAAAAAAGAAAAACAAAUACAUUUUUAAAAA
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Structure
        10        20        30          40        50      
UGGGUAUGUACAAAUAAAAUGGCAUGGCAG--|    C  UU       C    CAG 
                                GCCUU UC  UCCAGUU UUCC   A
                                UGGGA AG  GGGUCGA AAGG   A
AAAAAUUUUUACAUAAACAAAAAGAAAAAAAA^    C  UU       A    GUU 
  110       100        90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-320-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- GCCUUCUCUUUCCAGUUCUUCC -22
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Mature sequence

Mml-Mir-320-P4_3p (predicted)

mirBase accessionMIMAT0024326
Sequence
32- AAAAGCUGGGUUGACAGGGUAA -54
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Proposed targets TargetScanVert: mml-miR-320c