MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-320

Family name MIR-320 (all species)
Seed AAAGCUG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-320
Paralogues
Orthologues Bta-Mir-320-P1c  Bta-Mir-320-P1d  Cja-Mir-320-P1  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P1  Hsa-Mir-320-P2a  Hsa-Mir-320-P2b  Hsa-Mir-320-P3  Hsa-Mir-320-P4  Laf-Mir-320  Mml-Mir-320-P1  Mml-Mir-320-P2a  Mml-Mir-320-P2b  Mml-Mir-320-P3  Mml-Mir-320-P4  Mmr-Mir-320-P1a  Mmr-Mir-320-P1b  Mmr-Mir-320-P1c  Mmr-Mir-320-P1d  Mmr-Mir-320-P5  Mmr-Mir-320-P6  Mmr-Mir-320-P7  Mmr-Mir-320-P8  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P1  Pab-Mir-320-P2a  Pab-Mir-320-P2b  Pab-Mir-320-P3  Pab-Mir-320-P4  Rno-Mir-320 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr25: 35016676-35016729 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUUAUCCGGCGGCGCCUCGCUCCCCUCCGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGAAAAAGGAAGAGGGGUCUGGUCUGGGUUACG
Get precursor sequence
Structure
        10          20         30        40        50      
UAUUUAUCCGGCGGCGC--|  GC   CCUC-         UU       C    CGG 
                   CUC  UCC     CGCCUUCUC  CCCGGUU UUCC   A
                   GAG  AGG     GCGGGAGAG  GGGUCGA AAGG   G
GCAUUGGGUCUGGUCUGGG^  A-   AAAAA         UU       A    GCU 
  110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-320_5p*
mirBase accessionNone
Sequence 
0- GCCUUCUCUUCCCGGUUCUUCC -22
Get sequence
Mature sequence

Cfa-Mir-320_3p
mirBase accessionMIMAT0006658
Sequence 
32- AAAAGCUGGGUUGAGAGGGCGA -54
Get sequence
Proposed targets TargetScanVert: cfa-miR-320
miRDB: MIMAT0006658