MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-320-P1d

Family name MIR-320 (all species)
Seed AAAGCUG
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-320a-4
Paralogues Mmr-Mir-320-P1a  Mmr-Mir-320-P1b  Mmr-Mir-320-P1c  Mmr-Mir-320-P5  Mmr-Mir-320-P6  Mmr-Mir-320-P7  Mmr-Mir-320-P8 
Orthologues Bta-Mir-320-P1d  Cfa-Mir-320  Cja-Mir-320-P1  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P1  Laf-Mir-320  Mml-Mir-320-P1  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P1  Rno-Mir-320 
Node of Origin (locus) M. murinus
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007668.1: 44140413-44140466 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAUUUUUUGACUUUAAAAACCAGGUGCAGGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGGAAAAAAAAAAAAAAAAAACCAGGUGCAGCU
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Structure
        10        20        30          40        50      
ACAUUUUUUGACUUUAAAAACCAGGUGCAG--|       UU       C    CGG 
                                GCCUUCUC  CCCGGUU UUCC   A
                                CGGGAGAG  GGGUCGA AAGG   G
UCGACGUGGACCAAAAAAAAAAAAAAAAAAGG^       UU       A    GCU 
  110       100        90        80        70        60
Deep sequencing
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CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-320-P1d_5p*
mirBase accessionNone
Sequence 
0- GCCUUCUCUUCCCGGUUCUUCC -22
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Mature sequence

Mmr-Mir-320-P1d_3p
mirBase accessionMIMAT0049150
Sequence 
32- AAAAGCUGGGUUGAGAGGGCGG -54
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