MirGeneDB 3.0

MirGeneDB ID

Mml-Mir-320-P1

Family name MIR-320 (all species)
Seed AAAGCUG
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-320a
Paralogues Mml-Mir-320-P2a  Mml-Mir-320-P2b  Mml-Mir-320-P3  Mml-Mir-320-P4 
Orthologues Bta-Mir-320-P1c  Bta-Mir-320-P1d  Cfa-Mir-320  Cja-Mir-320-P1  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P1  Laf-Mir-320  Mmr-Mir-320-P1a  Mmr-Mir-320-P1b  Mmr-Mir-320-P1c  Mmr-Mir-320-P1d  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P1  Rno-Mir-320 
Node of Origin (locus) Primates
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014343.1: 22409333-22409386 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUUAUCAGGCGGCGCUUCGCUCCCCUCCGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGAAAAAGGAUGAGGGAACCGGUCUGGGCUACG
Get precursor sequence
Structure
        10          20         30        40        50      
UAUUUAUCAGGCGGCGC--|   C   CCUC-         UU       C    CGG 
                   UUCG UCC     CGCCUUCUC  CCCGGUU UUCC   A
                   GAGU AGG     GCGGGAGAG  GGGUCGA AAGG   G
GCAUCGGGUCUGGCCAAGG^   -   AAAAA         UU       A    GCU 
  110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentAs a non-canonical (Group 3, Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-320-P1_5p*

mirBase accessionNone
Sequence
0- GCCUUCUCUUCCCGGUUCUUCC -22
Get sequence
Mature sequence

Mml-Mir-320-P1_3p

mirBase accessionMIMAT0006263
Sequence
32- AAAAGCUGGGUUGAGAGGGCGA -54
Get sequence
Proposed targets TargetScanVert: mml-miR-320a