MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-320

Family name MIR-320 (all species)
Seed AAAGCUG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-320-P1c  Bta-Mir-320-P1d  Cfa-Mir-320  Cja-Mir-320-P1  Cpo-Mir-320  Dno-Mir-320  Eca-Mir-320  Ete-Mir-320  Hsa-Mir-320-P1  Hsa-Mir-320-P2a  Hsa-Mir-320-P2b  Hsa-Mir-320-P3  Hsa-Mir-320-P4  Mml-Mir-320-P1  Mml-Mir-320-P2a  Mml-Mir-320-P2b  Mml-Mir-320-P3  Mml-Mir-320-P4  Mmr-Mir-320-P1a  Mmr-Mir-320-P1b  Mmr-Mir-320-P1c  Mmr-Mir-320-P1d  Mmr-Mir-320-P5  Mmr-Mir-320-P6  Mmr-Mir-320-P7  Mmr-Mir-320-P8  Mmu-Mir-320  Ocu-Mir-320  Pab-Mir-320-P1  Pab-Mir-320-P2a  Pab-Mir-320-P2b  Pab-Mir-320-P3  Pab-Mir-320-P4  Rno-Mir-320 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010049.1: 14355599-14355650 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUAUCAAGCGGCACCUCGCUCCCCUCCGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGAAAAAGGAUGAGAGGACGGGUCUGGGUUAC
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Structure
        10        20            30        40        50     
AUUUAUCAAGCGGCACCUCG   C-   C---|        UU       C    CGG 
                    CUC  CCU    CGCCUUCUC  CCCGGUU UUCC   A
                    GAG  GGA    GCGGGAGAG  GGGUCGA AAGG   G
CAUUGGGUCUGGGCAGGA--   UA   AAAA^        UU       A    GCU 
110       100          90        80        70        60
Deep sequencing
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CommentAs a Group 3 (Kim et al. 2016) Drosha-independent 5' capped miRNA few star reads are cloned and sequenced.
3' NTU No
MotifsNo
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-320_5p* (predicted)
mirBase accessionNone
Sequence 
0- CCUUCUCUUCCCGGUUCUUCC -21
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Mature sequence

Laf-Mir-320_3p
mirBase accessionNone
Sequence 
31- AAAAGCUGGGUUGAGAGGGCG -52
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